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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
143
total RNA-seq
60
ChIP-seq
6
WGBS
1
FAIRE-seq
Assay category
143
Transcription
60
DNA binding
6
DNA methylation
1
DNA accessibility
Target of assay
27
histone
27
histone modification
27
narrow histone mark
26
control
7
transcription factor
3
other context
3
other post-translational modification
Date released
545
February, 2021
258
August, 2017
238
October, 2019
229
August, 2021
193
May, 2020
120
July, 2018
115
May, 2019
95
February, 2023
80
April, 2019
77
July, 2019
76
November, 2017
74
October, 2018
66
May, 2022
48
December, 2017
47
September, 2023
40
March, 2020
40
May, 2021
40
May, 2024
40
November, 2019
25
February, 2020
19
April, 2020
19
October, 2017
17
November, 2018
15
May, 2023
8
January, 2021
7
December, 2018
7
January, 2019
6
April, 2018
6
September, 2017
4
March, 2019
4
November, 2020
3
December, 2019
2
January, 2018
1
August, 2022
Available data
219
bam
193
bigWig
143
tsv
50
tagAlign
44
bed narrowPeak
26
fastq
17
bigBed narrowPeak
9
bed bed3+
bed broadPeak
9
bigBed broadPeak
6
bed bedMethyl
6
bigBed bedMethyl
Organism
210
Homo sapiens
Biosample type
210
tissue
148
primary cell
62
cell line
Organ
197
liver
8
spleen
5
pancreas
Project
210
AMP
Genome assembly (visualization)
178
hg19
175
GRCh38
Lab
210
AMP-T2D consortium
files.file_type!
bed broadPeak
organ_slims!
bone marrow
BIOSAMPLE
ASSAY
210 results
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Clear Filters
total RNA-seq
ChIP-seq
WGBS
FAIRE-seq
tissue
liver
143
54
spleen
6
2
pancreas
2
1
body of pancreas
2
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