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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
195
ChIP-seq
22
total RNA-seq
15
ATAC-seq
4
pCHi-C
1
Hi-C
Assay category
195
DNA binding
22
Transcription
15
DNA accessibility
1
3D chromatin structure
Target of assay
168
histone
168
histone modification
129
narrow histone mark
39
broad histone mark
27
control
Date released
237
October, 2019
228
August, 2021
202
August, 2017
193
May, 2020
159
February, 2021
120
July, 2018
115
May, 2019
94
February, 2023
80
April, 2019
76
November, 2017
67
July, 2019
66
May, 2022
51
October, 2018
48
December, 2017
47
September, 2023
40
May, 2021
40
May, 2024
39
March, 2020
39
November, 2019
23
February, 2020
19
April, 2020
18
October, 2017
17
November, 2018
14
May, 2023
8
January, 2021
7
December, 2018
7
January, 2019
6
April, 2018
6
September, 2017
4
March, 2019
4
November, 2020
3
December, 2019
1
August, 2022
1
January, 2018
Available data
186
bam
159
bigWig
151
bed narrowPeak
49
tagAlign
46
bigBed narrowPeak
8
tsv
4
bed bed3+
bed broadPeak
4
bigBed broadPeak
1
bedpe bed3+
1
hic
1
tagAlign bed3+
Organism
237
Homo sapiens
Biosample type
237
tissue
30
primary cell
29
cell line
8
in vitro differentiated cells
Organ
86
brain
65
limb
40
nerve
24
artery
24
blood vessel
24
vasculature
21
eye
8
heart
6
liver
4
gonad
4
kidney
4
ovary
3
pancreas
2
connective tissue
2
pituitary gland
adipose tissue
1
lymph node
1
skin of body
Project
237
AMP
Genome assembly (visualization)
158
hg19
157
GRCh38
Lab
237
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
files.file_type!
bed broadPeak
organ_slims!
adipose tissue
BIOSAMPLE
ASSAY
237 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
pCHi-C
Hi-C
tissue
islet of Langerhans
21
14
13
4
tibial nerve
35
4
1
tibial artery
23
1
heart
5
2
1
brain
5
1
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