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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
527
ChIP-seq
Assay category
527
DNA binding
Target of assay
527
histone modification
526
histone
284
narrow histone mark
242
broad histone mark
170
control
82
transcription factor
18
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
2
nucleotide modification
Date released
163
October, 2019
118
August, 2017
76
May, 2019
70
November, 2017
30
October, 2018
27
May, 2020
18
April, 2019
12
October, 2017
6
January, 2019
5
December, 2017
2
March, 2020
Available data
421
bigWig
419
bed narrowPeak
401
bam
252
bigBed narrowPeak
180
tagAlign
68
fastq
29
bed broadPeak
12
bed bed3+
1
tagAlign bed3+
Organism
527
Homo sapiens
Biosample type
527
tissue
235
primary cell
112
in vitro differentiated cells
38
cell line
2
stem cell
Organ
184
brain
heart
70
liver
67
pancreas
54
blood vessel
54
vasculature
49
limb
33
connective tissue
32
adipose tissue
25
musculature of body
24
nerve
20
artery
20
kidney
6
spleen
4
gonad
4
ovary
2
eye
1
lymph node
1
pituitary gland
Project
525
AMP
2
T1D
Genome assembly (visualization)
394
GRCh38
372
hg19
Lab
527
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
8
missing controlled_by
Audit category:
6
inconsistent control read length
files.file_type!
bedpe
organ_slims!
heart
BIOSAMPLE
ASSAY
527 results
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Clear Filters
ChIP-seq
tissue
liver
65
islet of Langerhans
51
subcutaneous abdominal adipose tissue
31
tibial nerve
24
kidney
20
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