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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
558
ChIP-seq
Assay category
558
DNA binding
Target of assay
558
histone
558
histone modification
280
narrow histone mark
278
broad histone mark
141
control
55
transcription factor
26
RNA binding protein
3
other context
3
other post-translational modification
2
nucleotide modification
Date released
163
October, 2019
91
August, 2017
89
May, 2019
70
November, 2017
60
April, 2019
35
May, 2024
30
October, 2018
12
October, 2017
6
January, 2019
2
March, 2020
Available data
472
bigWig
470
bed narrowPeak
416
bam
302
bigBed narrowPeak
142
tagAlign
56
fastq
35
bed broadPeak
12
bed bed3+
1
tagAlign bed3+
Organism
552
Homo sapiens
Biosample type
558
tissue
234
primary cell
100
in vitro differentiated cells
20
cell line
2
stem cell
Organ
184
brain
95
heart
73
pancreas
liver
54
blood vessel
54
vasculature
49
limb
33
connective tissue
32
adipose tissue
25
musculature of body
24
nerve
20
artery
20
kidney
6
spleen
4
gonad
4
ovary
2
eye
1
lymph node
1
pituitary gland
Project
556
AMP
2
T1D
Genome assembly (visualization)
452
GRCh38
388
hg19
Lab
523
AMP-T2D consortium
35
Patrick T. Ellinor, Broad
Audit category:
2
inconsistent ontology term
Audit category:
8
missing controlled_by
Audit category:
5
inconsistent control read length
1
inconsistent assembly
files.file_type!
bedpe
organ_slims!
liver
BIOSAMPLE
ASSAY
558 results
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Clear Filters
ChIP-seq
tissue
islet of Langerhans
51
left cardiac atrium
35
subcutaneous abdominal adipose tissue
31
heart left ventricle
24
tibial nerve
24
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