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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
457
total RNA-seq
87
ATAC-seq
84
RNA microarray
10
snATAC-seq
7
single cell RNA-seq
3
snDrop-seq
Assay category
464
Transcription
97
DNA accessibility
Date released
545
February, 2021
284
August, 2017
241
October, 2019
228
August, 2021
193
May, 2020
163
June, 2019
120
July, 2018
115
May, 2019
95
February, 2023
82
November, 2017
80
April, 2019
77
July, 2019
74
October, 2018
66
May, 2022
48
December, 2017
47
September, 2023
40
May, 2021
40
May, 2024
39
November, 2019
33
March, 2020
26
November, 2018
25
February, 2020
23
October, 2017
19
April, 2020
15
May, 2023
8
January, 2021
7
December, 2018
7
January, 2019
6
April, 2018
6
September, 2017
5
March, 2019
4
November, 2020
3
December, 2019
2
January, 2018
1
August, 2022
Available data
456
tsv
452
bam
444
bigWig
93
txt
71
bed narrowPeak
6
csv
5
bed bed3
Organism
648
Homo sapiens
Biosample type
648
tissue
144
primary cell
102
cell line
42
in vitro differentiated cells
Organ
445
connective tissue
387
adipose tissue
158
bone element
36
heart
35
artery
35
blood vessel
35
vasculature
31
eye
26
pancreas
16
skeleton
14
epithelium
8
kidney
6
limb
1
brain
1
liver
Project
622
AMP
26
T1D
Genome assembly (visualization)
487
GRCh38
485
hg19
Lab
622
AMP-T2D consortium
26
Kyle Gaulton, UCSD
Audit category:
84
inconsistent ontology term
5
audit script error
files.file_type!
bedpe bed3+
BIOSAMPLE
ASSAY
648 results
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total RNA-seq
ATAC-seq
RNA microarray
snATAC-seq
single cell RNA-seq
snDrop-seq
tissue
adipose tissue
381
1
bone element
84
bone tissue
58
coronary artery
35
islet of Langerhans
5
11
6
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