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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
444
total RNA-seq
84
RNA microarray
8
ATAC-seq
8
snATAC-seq
7
ChIP-seq
6
single cell RNA-seq
3
snDrop-seq
Assay category
450
Transcription
16
DNA accessibility
7
DNA binding
Target of assay
6
histone
6
histone modification
4
broad histone mark
2
narrow histone mark
1
control
Date released
545
February, 2021
284
August, 2017
241
October, 2019
228
August, 2021
193
May, 2020
163
June, 2019
120
July, 2018
115
May, 2019
95
February, 2023
82
November, 2017
80
April, 2019
77
July, 2019
74
October, 2018
66
May, 2022
48
December, 2017
47
September, 2023
40
May, 2021
40
May, 2024
39
November, 2019
33
March, 2020
26
November, 2018
25
February, 2020
23
October, 2017
19
April, 2020
15
May, 2023
8
January, 2021
7
December, 2018
7
January, 2019
6
April, 2018
6
September, 2017
5
March, 2019
4
November, 2020
3
December, 2019
2
January, 2018
1
August, 2022
Available data
459
bam
452
tsv
450
bigWig
89
txt
14
bed narrowPeak
7
fastq
6
bigBed narrowPeak
6
csv
Organism
560
Homo sapiens
Biosample type
560
tissue
119
cell line
56
primary cell
26
in vitro differentiated cells
Organ
444
connective tissue
386
adipose tissue
150
bone element
8
kidney
8
pancreas
8
skeleton
7
spleen
6
limb
1
liver
Project
552
AMP
8
T1D
Genome assembly (visualization)
458
GRCh38
458
hg19
Lab
552
AMP-T2D consortium
8
Kyle Gaulton, UCSD
Audit category:
84
inconsistent ontology term
5
audit script error
files.file_type!
bedpe bed3+
BIOSAMPLE
ASSAY
560 results
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Clear Filters
total RNA-seq
RNA microarray
ATAC-seq
snATAC-seq
ChIP-seq
single cell RNA-seq
snDrop-seq
tissue
adipose tissue
381
bone element
84
bone tissue
58
spleen
7
kidney
5
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