Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
96
candidate regulatory elements
60
chromatin state
58
target gene predictions
45
histone modifications
39
Fine-mapped variants
37
eQTL
27
accessible chromatin
20
gene expression
10
variant allelic effects
6
binding sites
1
caQTL
1
differential activity
Date released
159
September, 2022
95
February, 2021
43
March, 2020
21
January, 2020
20
February, 2020
18
January, 2022
12
June, 2020
12
May, 2020
7
August, 2017
6
August, 2021
2
May, 2022
1
February, 2024
1
March, 2024
1
May, 2021
1
November, 2019
1
September, 2018
Available data
243
bed bed3+
73
tsv
59
bed bed9
14
bigWig
bigBed bed9
1
bam
Organism
399
Homo sapiens
Biosample type
400
tissue
105
cell line
98
primary cell
11
in vitro differentiated cells
1
stem cell
Organ
343
brain
304
musculature of body
299
kidney
232
intestine
232
limb
204
heart
181
lung
134
large intestine
112
pancreas
108
stomach
98
extraembryonic component
94
connective tissue
83
adipose tissue
80
small intestine
78
blood vessel
78
vasculature
70
eye
64
ureter
62
adrenal gland
61
epithelium
60
placenta
57
liver
48
thymus
40
artery
39
gonad
36
spinal cord
35
embryo
35
esophagus
34
spleen
25
skin of body
24
nerve
22
bone element
21
ovary
20
thyroid gland
18
lymphoid tissue
18
skeleton
18
testis
15
prostate gland
13
breast
13
uterus
11
mouth
10
tongue
10
urinary bladder
10
vagina
4
bodily fluid
3
blood
3
pituitary gland
2
mammary gland
2
penis
1
vein
Project
400
AMP
Genome assembly (visualization)
353
hg19
137
GRCh38
1
hg18
files.file_type!
bigBed bed9
month_released!
January, 2021
BIOSAMPLE
TYPE
400 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
chromatin state
target gene predictions
histone modifications
Fine-mapped variants
eQTL
accessible chromatin
gene expression
variant allelic effects
binding sites
caQTL
differential activity
tissue
brain
29
16
16
3
2
2
1
1
1
liver
13
8
10
2
7
4
1
1
1
1
caudate nucleus
5
4
3
1
3
2
2
1
1
substantia nigra
5
3
2
1
3
3
1
cerebellum
3
2
2
1
3
2
1
2
+ See 58 more…
See all biosamples
Download