Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
919
candidate regulatory elements
505
target gene predictions
470
chromatin state
189
accessible chromatin
109
eQTL
105
gene expression
88
histone modifications
65
Fine-mapped variants
42
variant allelic effects
36
binding sites
4
differential activity
4
variant to gene
3
pQTL
2
sQTL
1
caQTL
1
other
Date released
1347
September, 2022
631
February, 2021
93
March, 2020
62
June, 2020
53
January, 2020
53
January, 2022
51
May, 2020
45
August, 2021
45
February, 2020
30
May, 2021
27
March, 2024
25
February, 2024
24
February, 2023
17
November, 2022
15
August, 2017
6
March, 2023
6
November, 2019
3
September, 2018
2
January, 2018
2
May, 2022
2
October, 2019
1
April, 2019
1
August, 2020
1
August, 2022
Available data
1803
bed bed3+
462
bed bed9
194
tsv
111
bigWig
bigBed bed9
1
bam
Organism
2541
Homo sapiens
Biosample type
2543
tissue
2341
cell line
2295
primary cell
463
in vitro differentiated cells
4
stem cell
Organ
343
brain
304
musculature of body
299
kidney
232
intestine
232
limb
204
heart
181
lung
134
large intestine
112
pancreas
108
stomach
98
extraembryonic component
94
connective tissue
83
adipose tissue
80
small intestine
78
blood vessel
vasculature
70
eye
64
ureter
62
adrenal gland
61
epithelium
60
placenta
57
liver
48
thymus
40
artery
39
gonad
36
spinal cord
35
embryo
35
esophagus
34
spleen
25
skin of body
24
nerve
22
bone element
21
ovary
20
thyroid gland
18
lymphoid tissue
18
skeleton
18
testis
15
prostate gland
13
breast
13
uterus
11
mouth
10
tongue
10
urinary bladder
10
vagina
4
bodily fluid
3
blood
3
pituitary gland
2
mammary gland
2
penis
1
vein
Project
2538
AMP
5
ITG
Genome assembly (visualization)
2359
hg19
674
GRCh38
3
hg18
files.file_type!
bigBed bed9
month_released!
May, 2019
organ_slims!
trachea
vasculature
BIOSAMPLE
TYPE
2543 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
eQTL
gene expression
histone modifications
Fine-mapped variants
variant allelic effects
binding sites
differential activity
variant to gene
pQTL
sQTL
caQTL
other
tissue
heart
37
20
19
5
3
1
2
1
stomach
40
21
19
3
1
1
1
kidney
29
14
14
10
1
7
2
1
1
brain
29
16
16
2
2
1
3
1
1
lung
33
17
16
1
1
+ See 252 more…
See all biosamples
Download