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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ATAC-seq
19
total RNA-seq
4
pCHi-C
2
ChIP-seq
Assay category
28
DNA accessibility
19
Transcription
2
DNA binding
Target of assay
2
histone
2
histone modification
2
narrow histone mark
Date released
31
February, 2023
21
October, 2019
1
February, 2020
Available data
30
bed narrowPeak
5
tsv
3
bam
3
bed bed3+
3
bed broadPeak
bigBed broadPeak
3
bigBed narrowPeak
3
bigWig
Organism
53
Homo sapiens
Biosample type
53
tissue
4
primary cell
Organ
525
connective tissue
466
adipose tissue
338
pancreas
333
liver
229
heart
221
kidney
168
brain
158
bone element
92
blood vessel
92
vasculature
55
artery
53
eye
52
limb
34
musculature of body
25
nerve
20
lung
20
spleen
16
skeleton
15
epithelium
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
esophagus
1
large intestine
1
lymph node
1
pericardium
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
53
AMP
Genome assembly (visualization)
27
hg19
Lab
53
AMP-T2D consortium
files.file_type!
bigBed broadPeak
month_released!
July, 2018
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
53 results
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ATAC-seq
total RNA-seq
pCHi-C
ChIP-seq
tissue
islet of Langerhans
1
14
4
2
retina
15
3
pigmented layer of retina
12
2
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