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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
ChIP-seq
2
WGBS
1
ATAC-seq
1
DNase-seq
1
pCHi-C
Assay category
17
DNA binding
2
DNA accessibility
2
DNA methylation
Target of assay
8
control
6
histone
6
histone modification
6
transcription factor
4
broad histone mark
3
other context
other post-translational modification
2
narrow histone mark
Date released
7
December, 2018
7
January, 2019
6
November, 2018
1
March, 2020
1
October, 2017
Available data
21
bam
21
fastq
13
bigWig
11
bed narrowPeak
10
bigBed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
tsv
Organism
22
Homo sapiens
Biosample type
22
tissue
Organ
547
connective tissue
505
pancreas
488
adipose tissue
360
liver
313
heart
294
kidney
brain
158
bone element
133
blood vessel
133
vasculature
122
limb
82
musculature of body
73
artery
56
eye
43
nerve
22
spleen
20
lung
18
ureter
16
skeleton
15
epithelium
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
esophagus
1
large intestine
1
lymph node
1
pericardium
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
22
AMP
Genome assembly (visualization)
13
GRCh38
11
hg19
Lab
22
AMP-T2D consortium
files.file_type!
csv
organ_slims!
brain
target.investigated_as!
other post-translational modification
BIOSAMPLE
ASSAY
22 results
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ChIP-seq
WGBS
ATAC-seq
DNase-seq
pCHi-C
tissue
spleen
17
2
1
1
1
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