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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
20
snATAC-seq
11
ATAC-seq
9
single cell RNA-seq
6
total RNA-seq
1
pCHi-C
Assay category
31
DNA accessibility
15
Transcription
Date released
19
April, 2020
18
February, 2023
8
January, 2021
2
May, 2021
Available data
24
bam
fastq
18
bed narrowPeak
6
txt
Organism
46
Homo sapiens
Biosample type
239
primary cell
47
in vitro differentiated cells
47
tissue
5
cell line
Organ
27
pancreas
19
lung
1
thymus
Project
27
T1D
19
LungMap
1
AMP
Lab
2074
AMP-T2D consortium
Katalin Susztak, Upenn
47
KPMP
40
Karen Mohlke, UNC
40
Patrick T. Ellinor, Broad
28
Kyle Gaulton, UCSD
19
Xin Sun, UCSD
4
Bing Ren, UCSD
4
Rohit N. Kulkarni, M.D., Ph.D.
1
Maike Sander, UCSD
1
Mark McCarthy, Oxford
files.file_type!
fastq
lab.title!
Katalin Susztak, Upenn
BIOSAMPLE
ASSAY
47 results
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snATAC-seq
ATAC-seq
single cell RNA-seq
total RNA-seq
pCHi-C
tissue
islet of Langerhans
6
11
5
lung
10
9
pancreas
4
1
thymus
1
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