Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
64
total RNA-seq
49
ATAC-seq
28
ChIP-seq
4
DNase-seq
2
single cell RNA-seq
Assay category
66
Transcription
53
DNA accessibility
28
DNA binding
Target of assay
20
histone
20
histone modification
14
broad histone mark
7
control
6
narrow histone mark
1
RNA binding protein
1
transcription factor
Date released
150
February, 2021
43
February, 2023
26
October, 2019
5
May, 2019
2
August, 2021
2
February, 2020
2
June, 2019
1
July, 2019
Available data
100
bam
88
txt
85
bigWig
70
bed narrowPeak
62
tsv
25
bigBed narrowPeak
4
bed bed3
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
Organism
231
Homo sapiens
Biosample type
231
tissue
66
cell line
3
primary cell
Organ
504
connective tissue
445
adipose tissue
313
heart
299
kidney
292
pancreas
278
liver
253
brain
158
bone element
133
blood vessel
133
vasculature
122
limb
80
musculature of body
73
artery
56
eye
43
nerve
20
lung
18
ureter
16
skeleton
15
epithelium
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
esophagus
1
large intestine
1
lymph node
1
pericardium
1
skin of body
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
urinary bladder
Project
231
AMP
Genome assembly (visualization)
128
GRCh38
97
hg19
Lab
231
AMP-T2D consortium
Audit category:
84
inconsistent ontology term
files.file_type!
fastq
BIOSAMPLE
ASSAY
231 results
search-icon
table-tab-icon
Clear Filters
RNA microarray
total RNA-seq
ATAC-seq
ChIP-seq
DNase-seq
single cell RNA-seq
tissue
bone element
84
bone tissue
58
coronary artery
1
36
5
2
tibial artery
1
1
23
2
acetabular part of hip bone
1
1
+ See 12 more…
See all biosamples
Download