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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
80
ChIP-seq
23
total RNA-seq
14
small RNA-seq
12
WGBS
6
ATAC-seq
6
RRBS
4
Hi-C
2
FAIRE-seq
Assay category
80
DNA binding
37
Transcription
18
DNA methylation
8
DNA accessibility
4
3D chromatin structure
Target of assay
60
histone
60
histone modification
37
broad histone mark
23
narrow histone mark
14
control
6
transcription factor
4
RNA binding protein
Date released
241
October, 2019
227
August, 2017
193
May, 2020
171
August, 2021
162
June, 2019
120
July, 2018
115
May, 2019
90
February, 2023
82
November, 2017
80
April, 2019
70
February, 2021
67
July, 2019
59
May, 2022
51
October, 2018
48
December, 2017
47
September, 2023
40
May, 2021
40
May, 2024
39
March, 2020
39
November, 2019
25
November, 2018
23
February, 2020
22
October, 2017
19
April, 2020
14
May, 2023
8
January, 2021
7
December, 2018
7
January, 2019
6
April, 2018
6
September, 2017
5
March, 2019
4
November, 2020
3
December, 2019
1
August, 2022
1
January, 2018
Available data
133
bam
118
bigWig
72
bed narrowPeak
66
bigBed narrowPeak
37
tsv
14
bed bedMethyl
14
bigBed bedMethyl
Organism
147
Homo sapiens
Biosample type
147
tissue
29
primary cell
Organ
77
heart
27
kidney
11
brain
adipose tissue
10
connective tissue
8
liver
7
blood vessel
7
musculature of body
7
vasculature
6
pancreas
5
limb
1
artery
1
pericardium
Project
147
AMP
Genome assembly (visualization)
115
GRCh38
115
hg19
Lab
147
AMP-T2D consortium
files.file_type!
txt
organ_slims!
adipose tissue
BIOSAMPLE
ASSAY
147 results
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Clear Filters
ChIP-seq
total RNA-seq
small RNA-seq
WGBS
ATAC-seq
RRBS
Hi-C
FAIRE-seq
tissue
heart left ventricle
35
2
4
2
1
kidney
23
1
1
heart right ventricle
13
2
heart
9
2
1
1
right lobe of liver
2
2
1
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