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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
32
DNase-seq
7
ChIP-seq
3
total RNA-seq
1
WGBS
1
small RNA-seq
Assay category
32
DNA accessibility
7
DNA binding
4
Transcription
1
DNA methylation
Target of assay
6
histone
6
histone modification
4
broad histone mark
2
narrow histone mark
1
control
Date released
32
June, 2019
7
May, 2019
3
July, 2019
2
March, 2020
Available data
57
bigWig
51
bed narrowPeak
45
bed broadPeak
44
bam
38
bigBed narrowPeak
33
bed bed3+
32
bigBed broadPeak
15
tagAlign
7
tsv
3
bed bedMethyl
3
bigBed bedMethyl
2
bedpe bed3+
2
fastq
2
hic
1
txt
Organism
44
Homo sapiens
Biosample type
44
tissue
13
primary cell
Organ
498
connective tissue
440
adipose tissue
429
pancreas
288
liver
226
brain
132
heart
114
limb
98
kidney
87
blood vessel
87
vasculature
66
bone element
44
musculature of body
42
nerve
34
artery
18
ureter
17
spleen
8
skeleton
3
eye
1
pituitary gland
Project
44
AMP
Genome assembly (visualization)
42
GRCh38
42
hg19
Lab
44
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
month_released!
January, 2019
May, 2023
BIOSAMPLE
ASSAY
44 results
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DNase-seq
ChIP-seq
total RNA-seq
WGBS
small RNA-seq
tissue
muscle of leg
13
7
1
muscle of arm
17
psoas muscle
2
skeletal muscle tissue
1
1
forelimb muscle
1
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