Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
266
ChIP-seq
176
DNase-seq
1
snATAC-seq
Assay category
266
DNA binding
177
DNA accessibility
Target of assay
198
histone
198
histone modification
116
narrow histone mark
82
broad histone mark
55
control
13
transcription factor
2
RNA binding protein
Date released
163
June, 2019
85
August, 2017
66
November, 2017
53
October, 2019
50
May, 2020
14
October, 2017
9
November, 2018
2
September, 2017
1
May, 2022
Available data
1907
bam
1772
bigWig
1076
tsv
984
bed narrowPeak
561
bigBed narrowPeak
377
fastq
238
tagAlign
213
bed broadPeak
205
bed bed3+
176
bigBed broadPeak
157
txt
64
xls
24
bed bedMethyl
24
bigBed bedMethyl
11
hic
10
bedpe bed3+
6
csv
5
bed bed3
1
bedpe
1
tagAlign bed3+
Organism
436
Homo sapiens
Biosample type
443
tissue
134
primary cell
65
in vitro differentiated cells
23
cell line
3
stem cell
Organ
145
brain
76
liver
68
kidney
48
musculature of body
43
pancreas
36
limb
27
heart
18
ureter
14
adipose tissue
14
connective tissue
5
blood vessel
5
vasculature
4
artery
3
eye
2
nerve
1
pituitary gland
1
spleen
Project
443
AMP
Genome assembly (visualization)
320
GRCh38
294
hg19
Lab
443
AMP-T2D consortium
Audit category:
1
audit script error
1
inconsistent ontology term
Audit category:
18
missing controlled_by
Audit category:
1
inconsistent assembly
organ_slims!
pericardium
BIOSAMPLE
ASSAY
443 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
DNase-seq
snATAC-seq
tissue
liver
73
2
islet of Langerhans
30
brain
14
14
heart
18
muscle of arm
17
+ See 81 more…
See all biosamples
Download