Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
931
candidate regulatory elements
513
target gene predictions
191
accessible chromatin
88
histone modifications
36
binding sites
33
variant allelic effects
24
chromatin state
5
eQTL
2
pQTL
2
variant to gene
1
caQTL
1
sQTL
Date released
910
September, 2022
607
February, 2021
62
June, 2020
41
May, 2020
39
January, 2020
30
March, 2020
28
May, 2021
24
February, 2023
21
February, 2024
18
August, 2017
17
November, 2022
12
August, 2021
7
November, 2019
3
September, 2018
2
May, 2022
2
October, 2019
1
April, 2019
1
August, 2020
1
August, 2022
Available data
1827
bed bed3+
480
bed bed9
202
tsv
114
bigWig
29
bigBed bed9
1
bam
Organism
1827
Homo sapiens
Biosample type
2122
cell line
1827
tissue
1609
primary cell
347
in vitro differentiated cells
4
stem cell
Organ
225
kidney
224
musculature of body
208
brain
175
intestine
168
limb
141
heart
136
lung
101
large intestine
82
stomach
74
extraembryonic component
69
pancreas
63
eye
60
small intestine
54
epithelium
51
ureter
49
connective tissue
47
blood vessel
47
vasculature
46
adrenal gland
45
adipose tissue
45
placenta
37
thymus
35
liver
28
embryo
28
gonad
26
spleen
24
esophagus
artery
23
spinal cord
17
skin of body
15
bone element
15
ovary
15
skeleton
14
nerve
14
thyroid gland
13
lymphoid tissue
13
testis
11
prostate gland
9
breast
9
uterus
7
mouth
7
tongue
7
urinary bladder
6
vagina
2
mammary gland
2
penis
1
bodily fluid
1
pituitary gland
Project
1826
AMP
1
ITG
Genome assembly (visualization)
1827
hg19
89
GRCh38
organ_slims!
artery
trachea
BIOSAMPLE
TYPE
1827 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
histone modifications
binding sites
variant allelic effects
chromatin state
eQTL
pQTL
variant to gene
caQTL
sQTL
tissue
heart
37
20
5
1
1
2
stomach
40
21
3
1
kidney
29
14
10
2
1
1
1
brain
29
16
2
3
1
1
muscle of arm
33
16
1
1
+ See 214 more…
See all biosamples
Download