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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 176DNase-seq
  • 28ChIP-seq
  • 1snATAC-seq
Assay category
  • 177DNA accessibility
  • 28DNA binding
Target of assay
  • 13transcription factor
  • 12histone
  • 12histone modification
  • 6broad histone mark
  • 6narrow histone mark
  • 3control
  • 2RNA binding protein
Date released
  • 163June, 2019
  • 26August, 2017
  • 9November, 2018
  • 4October, 2019
  • 2September, 2017
  • 1May, 2022
Available data
  • 1907bam
  • 1772bigWig
  • 1076tsv
  • 984bed narrowPeak
  • 561bigBed narrowPeak
  • 377fastq
  • 238tagAlign
  • 213bed broadPeak
  • 205bed bed3+
  • 176bigBed broadPeak
  • 157txt
  • 64xls
  • 25bed bedMethyl
  • 25bigBed bedMethyl
  • 11hic
  • 10bedpe bed3+
  • 6csv
  • 5bed bed3
  • 1bedpe
  • 1tagAlign bed3+
Organism
  • 205Homo sapiens
Biosample type
  • 205tissue
  • 37primary cell
  • 25in vitro differentiated cells
  • 3cell line
  • 3stem cell
Organ
  • 68kidney
  • 36limb
  • 33musculature of body
  • 27brain
  • 27heart
  • 27pancreas
  • 18ureter
  • 6adipose tissue
  • 6connective tissue
  • 6liver
  • 5blood vessel
  • 5vasculature
  • 4artery
  • 3eye
  • 2nerve
  • 1spleen
Project
  • 205AMP
Genome assembly (visualization)
  • 204GRCh38
  • 189hg19
Lab
  • 205AMP-T2D consortium
Audit category:
  • 1audit script error
  • 1inconsistent ontology term
Audit category:
  • 14missing controlled_by
BIOSAMPLE
ASSAY

205 results

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Clear Filters
DNase-seq
ChIP-seq
snATAC-seq
tissue
islet of Langerhans21
heart18
muscle of arm17
brain14
kidney13
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