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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
454
total RNA-seq
3
DNase-seq
2
pCHi-C
2
small RNA-seq
1
ChIP-seq
Assay category
456
Transcription
3
DNA accessibility
1
DNA binding
Target of assay
1
histone
1
histone modification
1
narrow histone mark
Date released
444
February, 2021
10
July, 2019
2
February, 2020
2
March, 2020
2
November, 2018
1
August, 2017
1
June, 2019
Available data
522
bam
497
bigWig
458
tsv
67
fastq
27
bed narrowPeak
23
bigBed narrowPeak
8
tagAlign
7
bed bed3+
4
bed bedMethyl
4
bed broadPeak
4
bigBed bedMethyl
3
bigBed broadPeak
Organism
462
Homo sapiens
Biosample type
462
tissue
21
primary cell
6
in vitro differentiated cells
1
stem cell
Organ
460
connective tissue
402
adipose tissue
295
pancreas
157
liver
138
heart
80
kidney
59
brain
58
bone element
52
musculature of body
43
limb
19
blood vessel
19
vasculature
18
ureter
8
artery
8
eye
7
nerve
3
epithelium
2
intestine
2
spleen
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
ovary
1
small intestine
1
spinal cord
1
stomach
1
thymus
1
urinary bladder
Project
462
AMP
Genome assembly (visualization)
458
hg19
457
GRCh38
Lab
462
AMP-T2D consortium
BIOSAMPLE
ASSAY
462 results
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total RNA-seq
DNase-seq
pCHi-C
small RNA-seq
ChIP-seq
tissue
adipose tissue
381
1
bone tissue
58
omental fat pad
5
2
1
subcutaneous adipose tissue
7
1
visceral abdominal adipose tissue
3
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