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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
492
ChIP-seq
Assay category
492
DNA binding
Target of assay
493
histone modification
492
histone
253
broad histone mark
239
narrow histone mark
75
transcription factor
26
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
Date released
145
October, 2019
89
May, 2019
60
April, 2019
58
November, 2017
56
August, 2017
35
May, 2024
30
October, 2018
May, 2020
6
January, 2019
6
October, 2017
5
December, 2017
2
March, 2020
Available data
494
bigWig
492
bed narrowPeak
438
bam
312
bigBed narrowPeak
159
tagAlign
73
fastq
35
bed broadPeak
12
bed bed3+
1
tagAlign bed3+
Organism
486
Homo sapiens
Biosample type
492
tissue
216
primary cell
78
in vitro differentiated cells
35
cell line
2
stem cell
Organ
164
brain
95
heart
62
pancreas
54
blood vessel
54
vasculature
48
limb
24
nerve
22
liver
20
artery
20
kidney
19
musculature of body
6
spleen
2
adipose tissue
2
connective tissue
1
pituitary gland
Project
490
AMP
2
T1D
Genome assembly (visualization)
469
GRCh38
405
hg19
Lab
457
AMP-T2D consortium
35
Patrick T. Ellinor, Broad
Audit category:
2
inconsistent ontology term
Audit category:
4
missing controlled_by
Audit category:
6
inconsistent control read length
1
inconsistent assembly
files.file_type!
bedpe
month_released!
May, 2020
BIOSAMPLE
ASSAY
492 results
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Clear Filters
ChIP-seq
tissue
left cardiac atrium
35
heart left ventricle
24
tibial nerve
24
kidney
20
islet of Langerhans
19
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