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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
266
ChIP-seq
Assay category
266
DNA binding
Target of assay
520
histone modification
519
histone
266
narrow histone mark
253
broad histone mark
75
transcription factor
26
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
Date released
106
October, 2019
33
May, 2019
27
May, 2020
24
August, 2017
23
April, 2019
20
November, 2017
15
May, 2024
11
October, 2018
2
December, 2017
2
January, 2019
2
March, 2020
1
October, 2017
Available data
268
bigWig
266
bed narrowPeak
243
bam
110
tagAlign
108
bigBed narrowPeak
28
fastq
15
bed broadPeak
6
bed bed3+
1
tagAlign bed3+
Organism
264
Homo sapiens
Biosample type
266
tissue
104
primary cell
40
in vitro differentiated cells
18
cell line
1
stem cell
Organ
103
brain
38
heart
36
liver
26
pancreas
18
blood vessel
18
vasculature
14
limb
10
kidney
8
nerve
7
musculature of body
6
artery
2
adipose tissue
2
connective tissue
2
spleen
1
pituitary gland
Project
264
AMP
2
T1D
Genome assembly (visualization)
247
GRCh38
235
hg19
Lab
251
AMP-T2D consortium
15
Patrick T. Ellinor, Broad
Audit category:
2
inconsistent ontology term
Audit category:
2
missing controlled_by
Audit category:
3
inconsistent control read length
files.file_type!
csv
lab.title!
Rohit N. Kulkarni, M.D., Ph.D.
BIOSAMPLE
ASSAY
266 results
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Clear Filters
ChIP-seq
tissue
liver
34
left cardiac atrium
15
islet of Langerhans
10
kidney
10
heart left ventricle
9
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