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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
53
ChIP-seq
7
DNase-seq
4
WGBS
2
FAIRE-seq
2
RRBS
Assay category
53
DNA binding
9
DNA accessibility
6
DNA methylation
Target of assay
43
histone
43
histone modification
27
broad histone mark
16
narrow histone mark
10
transcription factor
6
RNA binding protein
Date released
40
October, 2018
14
August, 2017
7
November, 2018
4
June, 2019
2
July, 2019
1
May, 2019
Available data
429
bam
373
bigWig
275
tsv
213
fastq
123
bed narrowPeak
62
bigBed narrowPeak
27
bed bed3+
20
bed broadPeak
16
tagAlign
6
bed bedMethyl
6
bigBed bedMethyl
6
bigBed broadPeak
txt
3
bedpe bed3+
3
hic
1
bedpe
Organism
62
Homo sapiens
Biosample type
68
tissue
22
primary cell
7
cell line
Organ
117
brain
95
heart
88
kidney
85
limb
68
pancreas
63
blood vessel
63
vasculature
50
liver
41
musculature of body
26
nerve
25
artery
18
ureter
15
spleen
12
adipose tissue
12
connective tissue
3
eye
1
pericardium
Project
68
AMP
Genome assembly (visualization)
64
GRCh38
62
hg19
Lab
68
AMP-T2D consortium
Audit category:
5
inconsistent control read length
1
inconsistent assembly
files.file_type!
txt
BIOSAMPLE
ASSAY
68 results
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Clear Filters
ChIP-seq
DNase-seq
WGBS
FAIRE-seq
RRBS
tissue
body of pancreas
26
4
2
pancreas
13
2
2
1
1
endocrine pancreas
14
islet of Langerhans
1
1
1
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