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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
176
DNase-seq
64
ATAC-seq
Assay category
240
DNA accessibility
Date released
163
June, 2019
64
August, 2021
9
November, 2018
4
October, 2019
Available data
1907
bam
1772
bigWig
1076
tsv
984
bed narrowPeak
561
bigBed narrowPeak
377
fastq
238
tagAlign
213
bed broadPeak
205
bed bed3+
176
bigBed broadPeak
txt
64
xls
25
bed bedMethyl
25
bigBed bedMethyl
11
hic
10
bedpe bed3+
6
csv
5
bed bed3
bedpe
1
tagAlign bed3+
Organism
240
Homo sapiens
Biosample type
240
tissue
59
cell line
49
primary cell
1
in vitro differentiated cells
Organ
132
kidney
36
limb
32
musculature of body
27
brain
27
heart
18
ureter
6
pancreas
5
blood vessel
5
vasculature
4
artery
3
eye
3
liver
2
adipose tissue
2
connective tissue
2
nerve
1
spleen
Project
240
AMP
Genome assembly (visualization)
240
GRCh38
160
hg19
Lab
176
AMP-T2D consortium
64
Katalin Susztak, Upenn
Audit category:
1
inconsistent ontology term
files.file_type!
bedpe
txt
BIOSAMPLE
ASSAY
240 results
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DNase-seq
ATAC-seq
tissue
kidney
13
64
heart
18
muscle of arm
17
brain
14
muscle of leg
13
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