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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
324
ChIP-seq
3
ATAC-seq
2
FAIRE-seq
Assay category
324
DNA binding
5
DNA accessibility
Target of assay
269
histone
269
histone modification
177
broad histone mark
92
narrow histone mark
55
transcription factor
14
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
Date released
92
May, 2019
64
April, 2019
57
November, 2017
43
October, 2019
36
December, 2017
8
August, 2017
7
November, 2018
6
January, 2019
6
October, 2017
5
October, 2018
3
December, 2018
2
July, 2019
Available data
1478
bam
1399
bigWig
861
bed narrowPeak
801
tsv
499
bigBed narrowPeak
222
tagAlign
193
bed broadPeak
178
bed bed3+
bigBed broadPeak
164
fastq
151
txt
64
xls
19
bed bedMethyl
19
bigBed bedMethyl
8
hic
7
bedpe bed3+
6
csv
5
bed bed3
1
tagAlign bed3+
Organism
329
Homo sapiens
Biosample type
329
tissue
296
cell line
40
primary cell
16
in vitro differentiated cells
Organ
89
brain
61
heart
57
blood vessel
57
vasculature
pancreas
48
limb
46
liver
24
nerve
21
artery
19
kidney
12
spleen
8
adipose tissue
8
connective tissue
6
musculature of body
Project
329
AMP
Genome assembly (visualization)
325
GRCh38
277
hg19
Lab
329
AMP-T2D consortium
Audit category:
27
inconsistent control
Audit category:
3
missing controlled_by
Audit category:
1
inconsistent control read length
files.file_type!
bigBed broadPeak
organ_slims!
pancreas
BIOSAMPLE
ASSAY
329 results
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Clear Filters
ChIP-seq
ATAC-seq
FAIRE-seq
tissue
liver
38
heart left ventricle
28
tibial nerve
24
kidney
18
1
tibial artery
18
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