Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
452
total RNA-seq
14
ChIP-seq
4
ATAC-seq
2
DNase-seq
2
WGBS
2
small RNA-seq
Assay category
454
Transcription
14
DNA binding
6
DNA accessibility
2
DNA methylation
Target of assay
12
transcription factor
2
histone
2
histone modification
2
narrow histone mark
Date released
444
February, 2021
17
August, 2017
10
July, 2019
October, 2018
1
January, 2018
1
June, 2019
1
November, 2018
1
October, 2017
1
October, 2019
Available data
476
bigWig
475
bam
457
tsv
20
fastq
8
bed narrowPeak
8
tagAlign
6
bed bed3+
5
bigBed narrowPeak
3
bed broadPeak
2
bed bedMethyl
2
bigBed bedMethyl
2
bigBed broadPeak
Organism
476
Homo sapiens
Biosample type
476
tissue
57
in vitro differentiated cells
32
primary cell
Organ
476
connective tissue
418
adipose tissue
333
pancreas
265
liver
202
brain
157
heart
91
kidney
91
limb
70
blood vessel
70
vasculature
58
bone element
57
musculature of body
31
nerve
27
artery
18
ureter
16
spleen
3
eye
1
pituitary gland
Project
476
AMP
Genome assembly (visualization)
474
hg19
473
GRCh38
Lab
476
AMP-T2D consortium
Audit category:
12
missing controlled_by
month_released!
October, 2018
BIOSAMPLE
ASSAY
476 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
DNase-seq
WGBS
small RNA-seq
tissue
adipose tissue
381
1
2
2
bone tissue
58
white adipose tissue
12
omental fat pad
4
1
2
1
subcutaneous adipose tissue
6
1
1
+ See 2 more…
See all biosamples
Download