Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
108
total RNA-seq
83
ChIP-seq
2
ATAC-seq
2
WGBS
1
DNase-seq
1
FAIRE-seq
Assay category
108
Transcription
83
DNA binding
4
DNA accessibility
2
DNA methylation
Target of assay
60
histone modification
59
histone
33
broad histone mark
26
narrow histone mark
23
transcription factor
2
RNA binding protein
Date released
444
February, 2021
178
August, 2017
170
May, 2020
163
June, 2019
160
October, 2019
116
July, 2018
93
May, 2019
65
April, 2019
63
July, 2019
57
November, 2017
October, 2018
40
May, 2024
38
May, 2021
36
December, 2017
23
November, 2018
20
May, 2022
19
November, 2019
14
October, 2017
11
March, 2020
6
April, 2018
6
January, 2019
3
December, 2018
2
January, 2018
Available data
209
bam
197
bigWig
175
fastq
108
tsv
86
bed narrowPeak
59
tagAlign
26
bed bed3+
26
bed broadPeak
22
bigBed narrowPeak
5
bed bedMethyl
5
bigBed bedMethyl
1
bedpe bed3+
1
hic
Organism
191
Homo sapiens
Biosample type
197
tissue
48
in vitro differentiated cells
46
primary cell
12
cell line
Organ
149
pancreas
18
liver
17
adipose tissue
17
connective tissue
13
musculature of body
Project
197
AMP
Genome assembly (visualization)
195
hg19
176
GRCh38
Lab
197
AMP-T2D consortium
Audit category:
22
missing controlled_by
Audit category:
5
inconsistent control read length
1
inconsistent assembly
month_released!
October, 2018
BIOSAMPLE
ASSAY
197 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
WGBS
DNase-seq
FAIRE-seq
tissue
islet of Langerhans
108
27
1
1
liver
17
skeletal muscle tissue
13
pancreas
12
white adipose tissue
12
+ See 4 more…
See all biosamples
Download