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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
107
ChIP-seq
70
total RNA-seq
27
DNase-seq
6
WGBS
4
ATAC-seq
1
small RNA-seq
Assay category
107
DNA binding
71
Transcription
31
DNA accessibility
6
DNA methylation
Target of assay
95
histone
95
histone modification
57
broad histone mark
38
narrow histone mark
12
transcription factor
10
RNA binding protein
Date released
58
February, 2021
47
April, 2019
40
May, 2024
27
June, 2019
17
July, 2019
15
May, 2019
7
October, 2019
2
March, 2020
2
May, 2021
Available data
215
bigWig
198
bam
181
bed narrowPeak
169
tsv
88
bigBed narrowPeak
88
txt
27
bed bed3+
27
bed broadPeak
27
bigBed broadPeak
7
bed bedMethyl
7
bigBed bedMethyl
4
bed bed3
3
bedpe bed3+
3
hic
Organism
215
Homo sapiens
Biosample type
215
tissue
56
cell line
10
primary cell
1
in vitro differentiated cells
Organ
481
connective tissue
423
adipose tissue
373
pancreas
265
liver
202
brain
157
heart
91
kidney
91
limb
70
blood vessel
70
vasculature
58
bone element
57
musculature of body
31
nerve
27
artery
18
ureter
16
spleen
3
eye
1
pituitary gland
Project
215
AMP
Genome assembly (visualization)
214
GRCh38
167
hg19
Lab
175
AMP-T2D consortium
40
Patrick T. Ellinor, Broad
BIOSAMPLE
ASSAY
215 results
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ChIP-seq
total RNA-seq
DNase-seq
WGBS
ATAC-seq
small RNA-seq
tissue
bone tissue
58
left cardiac atrium
40
1
heart left ventricle
29
3
3
2
2
heart
12
4
18
1
1
heart right ventricle
11
1
1
2
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