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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
3
ChIP-seq
2
DNase-seq
1
ATAC-seq
Assay category
3
DNA accessibility
3
DNA binding
Target of assay
7
histone
7
histone modification
broad histone mark
2
control
1
narrow histone mark
Date released
4
October, 2017
2
November, 2018
Available data
165
bam
142
bigWig
131
bed narrowPeak
73
tagAlign
58
bigBed narrowPeak
32
bed broadPeak
27
bed bed3+
27
bigBed broadPeak
23
tsv
6
fastq
1
bed bed3
1
bed bedMethyl
1
bigBed bedMethyl
1
tagAlign bed3+
Organism
6
Homo sapiens
Biosample type
9
primary cell
6
tissue
Organ
188
pancreas
73
liver
43
adipose tissue
43
connective tissue
20
spleen
6
brain
2
musculature of body
Project
6
AMP
Genome assembly (visualization)
4
GRCh38
3
hg19
Lab
6
AMP-T2D consortium
Audit category:
1
missing controlled_by
organ_slims!
gonad
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
6 results
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ChIP-seq
DNase-seq
ATAC-seq
tissue
brain
3
2
cerebellum (Hemisphere)
1
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