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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
55
total RNA-seq
13
single cell RNA-seq
1
snATAC-seq
Assay category
68
Transcription
1
DNA accessibility
Date released
57
August, 2021
7
May, 2022
5
February, 2021
Available data
1375
bam
1192
bigWig
1018
tsv
456
bed narrowPeak
303
fastq
249
bigBed narrowPeak
193
bed bed3+
178
bed broadPeak
176
bigBed broadPeak
69
txt
64
xls
52
tagAlign
25
bed bedMethyl
25
bigBed bedMethyl
11
hic
10
bedpe bed3+
6
csv
1
bed bed3
1
bedpe
Organism
69
Homo sapiens
Biosample type
69
tissue
3
in vitro differentiated cells
1
cell line
Organ
bone element
62
kidney
6
pancreas
4
skeleton
1
musculature of body
Project
69
AMP
Genome assembly (visualization)
1
hg19
Lab
57
Katalin Susztak, Upenn
6
AMP-T2D consortium
6
Kyle Gaulton, UCSD
Audit category:
6
audit script error
organ_slims!
bone element
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
69 results
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total RNA-seq
single cell RNA-seq
snATAC-seq
tissue
kidney
49
13
islet of Langerhans
6
skeletal muscle tissue
1
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