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Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
37
ChIP-seq
6
WGBS
2
ATAC-seq
2
DNase-seq
Assay category
37
DNA binding
6
DNA methylation
4
DNA accessibility
Target of assay
29
histone
29
histone modification
18
broad histone mark
11
narrow histone mark
7
control
1
RNA binding protein
1
transcription factor
Date released
21
October, 2018
7
August, 2017
7
January, 2019
6
December, 2017
4
November, 2018
1
March, 2019
1
October, 2017
Available data
47
fastq
45
bam
37
bigWig
32
bed narrowPeak
31
bigBed narrowPeak
4
bed bedMethyl
4
bigBed bedMethyl
3
bed broadPeak
2
bed bed3+
2
bigBed broadPeak
Organism
47
Homo sapiens
Biosample type
52
in vitro differentiated cells
48
cell line
47
tissue
37
primary cell
4
stem cell
Organ
25
pancreas
9
liver
7
spleen
4
adipose tissue
4
connective tissue
2
brain
Project
47
AMP
Genome assembly (visualization)
37
GRCh38
32
hg19
Lab
46
AMP-T2D consortium
1
Mark McCarthy, Oxford
Audit category:
2
inconsistent control read length
BIOSAMPLE
ASSAY
47 results
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ChIP-seq
WGBS
ATAC-seq
DNase-seq
tissue
body of pancreas
20
spleen
7
right lobe of liver
6
adipose tissue
3
islet of Langerhans
2
1
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