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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 45ChIP-seq
  • 26ATAC-seq
  • 6total RNA-seq
  • 5WGBS
Assay category
  • 45DNA binding
  • 26DNA accessibility
  • 6Transcription
  • 5DNA methylation
Target of assay
  • 25transcription factor
  • 20control
  • 10RNA binding protein
Date released
  • 27October, 2018
  • 24May, 2022
  • 13August, 2017
  • 7December, 2018
  • 6October, 2017
  • 4December, 2017
  • 1November, 2018
Available data
  • 82fastq
  • 80bam
  • 44bed narrowPeak
  • 36bigWig
  • 20bigBed narrowPeak
  • 6txt
  • 3bed bedMethyl
  • 3bigBed bedMethyl
  • 2bed bed3+
Organism
  • 82Homo sapiens
Biosample type
  • 88cell line
  • 82tissue
  • 50primary cell
  • 15in vitro differentiated cells
Organ
  • 42pancreas
  • 26adipose tissue
  • 26connective tissue
  • 8spleen
  • 6liver
Project
  • 82AMP
Genome assembly (visualization)
  • 51hg19
  • 36GRCh38
Lab
  • 58AMP-T2D consortium
  • 24Kyle Gaulton, UCSD
Audit category:
  • 7missing controlled_by
BIOSAMPLE
ASSAY

82 results

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Clear Filters
ChIP-seq
ATAC-seq
total RNA-seq
WGBS
tissue
islet of Langerhans186
body of pancreas134
subcutaneous adipose tissue81
spleen71
omental fat pad61
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