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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ATAC-seq
19
total RNA-seq
4
pCHi-C
3
DNase-seq
Assay category
31
DNA accessibility
19
Transcription
Target of assay
histone
2
histone modification
2
narrow histone mark
Date released
31
February, 2023
19
October, 2019
3
June, 2019
1
February, 2020
Available data
30
bed narrowPeak
5
tsv
3
bam
3
bed bed3+
3
bed broadPeak
3
bigBed broadPeak
3
bigBed narrowPeak
3
bigWig
Organism
54
Homo sapiens
Biosample type
54
tissue
4
primary cell
Organ
514
connective tissue
456
adipose tissue
431
pancreas
292
liver
279
kidney
218
heart
158
bone element
81
brain
79
blood vessel
79
vasculature
73
limb
57
musculature of body
54
eye
53
artery
20
lung
19
nerve
19
spleen
18
ureter
16
skeleton
15
epithelium
2
intestine
2
thymus
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
ovary
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
54
AMP
Genome assembly (visualization)
30
hg19
3
GRCh38
Lab
54
AMP-T2D consortium
lab.title!
Stephen Parker, UMich
target.investigated_as!
histone
BIOSAMPLE
ASSAY
54 results
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Clear Filters
ATAC-seq
total RNA-seq
pCHi-C
DNase-seq
tissue
retina
15
3
3
islet of Langerhans
1
14
4
pigmented layer of retina
12
2
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