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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
pCHi-C
8
total RNA-seq
6
Hi-C
2
ATAC-seq
2
ChIP-seq
Assay category
8
Transcription
6
3D chromatin structure
2
DNA accessibility
2
DNA binding
Target of assay
2
histone
2
histone modification
2
narrow histone mark
Date released
545
February, 2021
284
August, 2017
223
August, 2021
216
October, 2019
193
May, 2020
160
June, 2019
July, 2018
82
November, 2017
80
April, 2019
74
October, 2018
70
July, 2019
66
May, 2022
65
May, 2019
60
February, 2023
48
December, 2017
47
September, 2023
40
May, 2021
40
May, 2024
40
November, 2019
37
March, 2020
26
November, 2018
23
October, 2017
22
February, 2020
19
April, 2020
15
May, 2023
8
January, 2021
7
December, 2018
7
January, 2019
6
April, 2018
6
September, 2017
5
March, 2019
4
November, 2020
3
December, 2019
2
January, 2018
1
August, 2022
Available data
26
tsv
10
bigWig
8
bam
6
bedpe bed3+
6
hic
2
bed narrowPeak
Organism
37
Homo sapiens
Biosample type
37
tissue
11
cell line
8
in vitro differentiated cells
4
stem cell
Organ
9
pancreas
7
heart
5
musculature of body
3
blood vessel
3
liver
vasculature
2
brain
2
intestine
1
adipose tissue
1
adrenal gland
1
connective tissue
1
esophagus
1
gonad
1
large intestine
1
lung
1
ovary
1
small intestine
1
spleen
1
stomach
1
thymus
1
urinary bladder
Project
33
AMP
4
T1D
Genome assembly (visualization)
16
hg19
8
GRCh38
Lab
37
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
lab.title!
Struan F.A. Grant, CHOP
month_released!
July, 2018
organ_slims!
vasculature
BIOSAMPLE
ASSAY
37 results
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Clear Filters
pCHi-C
total RNA-seq
Hi-C
ATAC-seq
ChIP-seq
tissue
islet of Langerhans
2
2
2
psoas muscle
1
2
2
heart left ventricle
1
1
1
heart right ventricle
1
1
1
liver
1
1
1
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