Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 29ATAC-seq
  • 12total RNA-seq
  • 10snATAC-seq
  • 1pCHi-C
Assay category
  • 39DNA accessibility
  • 12Transcription
Date released
  • 24May, 2022
  • 18February, 2023
  • 8January, 2021
  • 2May, 2021
Available data
  • 24bam
  • 24fastq
  • 18bed narrowPeak
  • 6txt
Organism
  • 52Homo sapiens
Biosample type
  • 239primary cell
  • 52tissue
  • 47in vitro differentiated cells
  • 5cell line
Organ
  • 51pancreas
  • 1thymus
Project
  • 27T1D
  • 25AMP
Genome assembly (visualization)
  • 18hg19
Lab
  • 2425AMP-T2D consortium
  • 142Katalin Susztak, Upenn
  • 52Kyle Gaulton, UCSD
  • 47KPMP
  • 40Karen Mohlke, UNC
  • 40Patrick T. Ellinor, Broad
  • 19Xin Sun, UCSD
  • 4Bing Ren, UCSD
  • 4Rohit N. Kulkarni, M.D., Ph.D.
  • 2Mark McCarthy, Oxford
  • 2Stephen Parker, UMich
  • 1Maike Sander, UCSD
BIOSAMPLE
ASSAY

52 results

search-icontable-tab-icon
Clear Filters
ATAC-seq
total RNA-seq
snATAC-seq
pCHi-C
tissue
islet of Langerhans29116
pancreas14
thymus1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego