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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
566
ChIP-seq
Assay category
566
DNA binding
Target of assay
567
histone modification
566
histone
300
narrow histone mark
266
broad histone mark
173
control
88
transcription factor
24
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
2
nucleotide modification
Date released
167
October, 2019
123
August, 2017
89
May, 2019
70
November, 2017
April, 2019
35
May, 2024
30
October, 2018
27
May, 2020
12
October, 2017
6
January, 2019
5
December, 2017
2
March, 2020
Available data
460
bigWig
458
bed narrowPeak
405
bam
253
bigBed narrowPeak
185
tagAlign
73
fastq
35
bed broadPeak
12
bed bed3+
1
tagAlign bed3+
Organism
560
Homo sapiens
Biosample type
566
tissue
237
primary cell
112
in vitro differentiated cells
38
cell line
2
stem cell
Organ
184
brain
73
pancreas
69
liver
54
blood vessel
54
vasculature
53
heart
49
limb
33
connective tissue
32
adipose tissue
25
musculature of body
24
nerve
20
artery
6
spleen
4
gonad
4
ovary
2
eye
2
kidney
1
lymph node
pituitary gland
Project
564
AMP
2
T1D
Genome assembly (visualization)
433
GRCh38
376
hg19
Lab
531
AMP-T2D consortium
35
Patrick T. Ellinor, Broad
Audit category:
2
inconsistent ontology term
Audit category:
8
missing controlled_by
Audit category:
6
inconsistent control read length
1
inconsistent assembly
month_released!
April, 2019
March, 2023
organ_slims!
pituitary gland
BIOSAMPLE
ASSAY
566 results
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Clear Filters
ChIP-seq
tissue
liver
64
islet of Langerhans
51
left cardiac atrium
35
subcutaneous abdominal adipose tissue
31
tibial nerve
24
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