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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
487
ChIP-seq
Assay category
487
DNA binding
Target of assay
487
histone modification
486
histone
256
narrow histone mark
230
broad histone mark
134
control
85
transcription factor
21
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
2
nucleotide modification
Date released
150
October, 2019
124
August, 2017
70
November, 2017
April, 2019
53
May, 2019
35
May, 2024
30
October, 2018
May, 2020
12
October, 2017
6
January, 2019
5
December, 2017
2
March, 2020
Available data
381
bigWig
379
bed narrowPeak
326
bam
199
bigBed narrowPeak
159
tagAlign
74
fastq
35
bed broadPeak
12
bed bed3+
1
tagAlign bed3+
Organism
481
Homo sapiens
Biosample type
487
tissue
221
primary cell
112
in vitro differentiated cells
38
cell line
2
stem cell
Organ
184
brain
73
pancreas
blood vessel
54
vasculature
53
heart
49
limb
43
liver
33
connective tissue
32
adipose tissue
25
musculature of body
24
nerve
20
artery
6
spleen
4
gonad
4
ovary
2
eye
2
kidney
1
lymph node
1
pituitary gland
Project
485
AMP
2
T1D
Genome assembly (visualization)
362
GRCh38
297
hg19
Lab
452
AMP-T2D consortium
35
Patrick T. Ellinor, Broad
Audit category:
2
inconsistent ontology term
Audit category:
8
missing controlled_by
Audit category:
6
inconsistent control read length
1
inconsistent assembly
month_released!
April, 2019
May, 2020
organ_slims!
blood vessel
BIOSAMPLE
ASSAY
487 results
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Clear Filters
ChIP-seq
tissue
islet of Langerhans
51
liver
38
left cardiac atrium
35
subcutaneous abdominal adipose tissue
31
tibial nerve
24
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