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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
287
ChIP-seq
Assay category
287
DNA binding
Target of assay
603
histone modification
602
histone
315
narrow histone mark
287
broad histone mark
183
control
94
transcription factor
28
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
2
nucleotide modification
Date released
61
August, 2017
52
May, 2019
42
November, 2017
39
October, 2019
37
April, 2019
20
May, 2024
19
October, 2018
10
October, 2017
4
January, 2019
3
December, 2017
Available data
241
bed narrowPeak
241
bigWig
218
bam
200
bigBed narrowPeak
68
tagAlign
45
fastq
12
bed broadPeak
6
bed bed3+
Organism
283
Homo sapiens
Biosample type
287
tissue
118
primary cell
56
in vitro differentiated cells
19
cell line
1
stem cell
Organ
70
brain
57
heart
41
pancreas
36
blood vessel
36
vasculature
34
limb
25
liver
20
adipose tissue
20
connective tissue
musculature of body
16
nerve
14
artery
10
kidney
4
spleen
Project
287
AMP
Genome assembly (visualization)
238
GRCh38
186
hg19
Lab
267
AMP-T2D consortium
20
Patrick T. Ellinor, Broad
Audit category:
4
missing controlled_by
Audit category:
3
inconsistent control read length
1
inconsistent assembly
month_released!
February, 2021
organ_slims!
musculature of body
BIOSAMPLE
ASSAY
287 results
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ChIP-seq
tissue
liver
22
left cardiac atrium
20
subcutaneous abdominal adipose tissue
20
tibial nerve
16
heart left ventricle
15
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