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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
454
ChIP-seq
Assay category
454
DNA binding
Target of assay
454
histone modification
453
histone
260
broad histone mark
193
narrow histone mark
159
control
94
transcription factor
28
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
2
nucleotide modification
Date released
October, 2019
124
August, 2017
89
May, 2019
70
November, 2017
60
April, 2019
35
May, 2024
30
October, 2018
27
May, 2020
12
October, 2017
January, 2019
5
December, 2017
2
March, 2020
Available data
371
bigWig
369
bed narrowPeak
315
bam
264
bigBed narrowPeak
146
tagAlign
68
fastq
35
bed broadPeak
12
bed bed3+
Organism
448
Homo sapiens
Biosample type
454
tissue
216
primary cell
112
in vitro differentiated cells
30
cell line
2
stem cell
Organ
107
brain
90
heart
73
pancreas
65
liver
36
blood vessel
36
vasculature
32
adipose tissue
32
connective tissue
25
musculature of body
18
kidney
6
limb
2
artery
Project
452
AMP
2
T1D
Genome assembly (visualization)
341
GRCh38
285
hg19
Lab
419
AMP-T2D consortium
35
Patrick T. Ellinor, Broad
Audit category:
8
missing controlled_by
Audit category:
6
inconsistent control read length
1
inconsistent assembly
month_released!
January, 2019
March, 2019
October, 2019
BIOSAMPLE
ASSAY
454 results
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Clear Filters
ChIP-seq
tissue
liver
60
left cardiac atrium
35
subcutaneous abdominal adipose tissue
31
islet of Langerhans
30
heart left ventricle
24
+ See 26 more…
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