Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
916
candidate regulatory elements
502
target gene predictions
485
chromatin state
188
accessible chromatin
109
eQTL
104
gene expression
88
histone modifications
65
Fine-mapped variants
42
variant allelic effects
36
binding sites
4
differential activity
4
variant to gene
3
pQTL
2
sQTL
1
caQTL
1
other
Date released
1341
September, 2022
630
February, 2021
92
March, 2020
61
June, 2020
55
January, 2020
53
January, 2022
53
May, 2020
45
August, 2021
45
February, 2020
30
May, 2021
26
March, 2024
25
February, 2024
24
February, 2023
19
August, 2017
17
November, 2022
8
April, 2019
May, 2019
7
November, 2019
6
March, 2023
3
October, 2019
3
September, 2018
2
January, 2018
2
May, 2022
1
August, 2020
1
August, 2022
Available data
1796
bed bed3+
460
bed bed9
193
tsv
111
bigWig
17
bigBed bed9
1
bam
Organism
2548
Homo sapiens
Biosample type
2550
tissue
2396
primary cell
2346
cell line
470
in vitro differentiated cells
4
stem cell
Organ
345
brain
304
musculature of body
300
kidney
234
limb
232
intestine
213
heart
181
lung
134
large intestine
114
pancreas
108
stomach
98
extraembryonic component
95
connective tissue
84
adipose tissue
blood vessel
83
vasculature
80
small intestine
70
eye
64
ureter
62
adrenal gland
61
epithelium
60
placenta
58
liver
48
thymus
41
artery
39
gonad
36
spinal cord
35
embryo
35
esophagus
34
spleen
25
nerve
25
skin of body
22
bone element
21
ovary
20
thyroid gland
18
lymphoid tissue
18
skeleton
18
testis
15
prostate gland
13
breast
13
uterus
11
mouth
10
tongue
urinary bladder
10
vagina
4
bodily fluid
3
blood
3
pituitary gland
2
mammary gland
2
penis
1
vein
Project
2545
AMP
5
ITG
Genome assembly (visualization)
2367
hg19
685
GRCh38
3
hg18
month_released!
May, 2019
organ_slims!
blood vessel
urinary bladder
BIOSAMPLE
TYPE
2550 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
eQTL
gene expression
histone modifications
Fine-mapped variants
variant allelic effects
binding sites
differential activity
variant to gene
pQTL
sQTL
caQTL
other
tissue
heart
37
20
21
5
3
1
2
1
stomach
40
21
19
3
1
1
1
kidney
29
14
15
10
1
7
2
1
1
brain
29
16
18
2
2
1
3
1
1
lung
33
17
16
1
1
+ See 249 more…
See all biosamples
Download