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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
36
ATAC-seq
5
ChIP-seq
2
DNase-seq
2
single cell RNA-seq
1
pCHi-C
1
total RNA-seq
Assay category
38
DNA accessibility
5
DNA binding
3
Transcription
Target of assay
2
control
2
histone
2
histone modification
2
narrow histone mark
1
RNA binding protein
1
transcription factor
Date released
35
February, 2023
5
May, 2019
2
August, 2021
2
June, 2019
1
February, 2020
1
July, 2019
1
March, 2020
Available data
41
bed narrowPeak
8
bam
6
bigWig
5
bigBed narrowPeak
4
tsv
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
Organism
47
Homo sapiens
Biosample type
66
cell line
47
tissue
2
primary cell
Organ
547
connective tissue
505
pancreas
488
adipose tissue
313
heart
299
kidney
265
brain
168
liver
158
bone element
133
blood vessel
133
vasculature
limb
82
musculature of body
73
artery
56
eye
43
nerve
25
spleen
20
lung
18
ureter
16
skeleton
15
epithelium
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
esophagus
1
large intestine
1
lymph node
1
pericardium
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
47
AMP
Genome assembly (visualization)
41
GRCh38
6
hg19
Lab
47
AMP-T2D consortium
month_released!
May, 2020
organ_slims!
limb
BIOSAMPLE
ASSAY
47 results
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ATAC-seq
ChIP-seq
DNase-seq
single cell RNA-seq
pCHi-C
total RNA-seq
tissue
coronary artery
36
5
2
1
pulmonary artery
2
esophagus
1
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