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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
22
ChIP-seq
4
Hi-C
4
RRBS
1
WGBS
1
small RNA-seq
1
total RNA-seq
Assay category
22
DNA binding
5
DNA methylation
4
3D chromatin structure
2
Transcription
Target of assay
19
histone
19
histone modification
12
broad histone mark
7
narrow histone mark
3
control
Date released
32
June, 2019
26
August, 2017
7
July, 2019
7
May, 2019
5
March, 2020
2
February, 2020
2
May, 2022
1
January, 2018
Available data
16
bigWig
15
tagAlign
13
bed broadPeak
13
bed narrowPeak
3
bam
3
bed bedMethyl
3
bigBed bedMethyl
2
fastq
2
tsv
Organism
33
Homo sapiens
Biosample type
33
tissue
3
primary cell
Organ
153
pancreas
67
adipose tissue
67
connective tissue
62
liver
33
musculature of body
20
heart
11
brain
7
blood vessel
7
vasculature
5
limb
4
kidney
1
artery
pericardium
Project
33
AMP
Genome assembly (visualization)
17
hg19
3
GRCh38
Lab
33
AMP-T2D consortium
organ_slims!
pericardium
BIOSAMPLE
ASSAY
33 results
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ChIP-seq
Hi-C
RRBS
WGBS
small RNA-seq
total RNA-seq
tissue
skeletal muscle tissue
22
4
1
1
gastrocnemius medialis
4
muscle of leg
1
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