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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
297
ChIP-seq
89
total RNA-seq
9
WGBS
5
RRBS
2
ATAC-seq
2
DNase-seq
1
FAIRE-seq
Assay category
297
DNA binding
89
Transcription
14
DNA methylation
5
DNA accessibility
Target of assay
213
histone modification
212
histone
129
broad histone mark
83
narrow histone mark
57
control
27
transcription factor
6
RNA binding protein
Date released
545
February, 2021
284
August, 2017
242
October, 2019
229
August, 2021
193
May, 2020
163
June, 2019
120
July, 2018
115
May, 2019
95
February, 2023
82
November, 2017
80
April, 2019
77
July, 2019
74
October, 2018
66
May, 2022
48
December, 2017
47
September, 2023
40
March, 2020
40
May, 2021
40
May, 2024
40
November, 2019
26
November, 2018
25
February, 2020
23
October, 2017
19
April, 2020
15
May, 2023
8
January, 2021
7
December, 2018
7
January, 2019
6
April, 2018
6
September, 2017
5
March, 2019
4
November, 2020
3
December, 2019
2
January, 2018
1
August, 2022
Available data
291
bam
271
bigWig
181
fastq
159
bed narrowPeak
115
bigBed narrowPeak
89
tsv
59
tagAlign
28
bed bed3+
26
bed broadPeak
5
bed bedMethyl
5
bigBed bedMethyl
Organism
398
Homo sapiens
Biosample type
405
tissue
69
primary cell
68
in vitro differentiated cells
Organ
155
pancreas
57
adipose tissue
57
connective tissue
54
liver
50
blood vessel
50
vasculature
33
musculature of body
28
brain
21
heart
7
limb
5
artery
Project
405
AMP
Genome assembly (visualization)
275
hg19
252
GRCh38
Lab
405
AMP-T2D consortium
Audit category:
22
missing controlled_by
Audit category:
5
inconsistent control read length
1
inconsistent assembly
BIOSAMPLE
ASSAY
405 results
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Clear Filters
ChIP-seq
total RNA-seq
WGBS
RRBS
ATAC-seq
DNase-seq
FAIRE-seq
tissue
islet of Langerhans
48
89
1
1
liver
48
3
1
subcutaneous abdominal adipose tissue
36
3
skeletal muscle tissue
22
4
ascending aorta
16
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