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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
270
ChIP-seq
89
total RNA-seq
9
WGBS
5
RRBS
2
ATAC-seq
2
DNase-seq
1
FAIRE-seq
Assay category
270
DNA binding
89
Transcription
14
DNA methylation
5
DNA accessibility
Target of assay
200
histone modification
199
histone
122
broad histone mark
77
narrow histone mark
45
control
25
transcription factor
4
RNA binding protein
Date released
545
February, 2021
284
August, 2017
234
October, 2019
193
May, 2020
137
August, 2021
136
June, 2019
120
July, 2018
94
May, 2019
82
November, 2017
74
October, 2018
66
May, 2022
59
February, 2023
57
July, 2019
48
December, 2017
47
September, 2023
40
November, 2019
38
May, 2021
33
March, 2020
26
November, 2018
23
April, 2019
23
October, 2017
22
February, 2020
19
April, 2020
15
May, 2023
8
January, 2021
7
December, 2018
7
January, 2019
6
April, 2018
6
September, 2017
5
March, 2019
4
November, 2020
3
December, 2019
2
January, 2018
1
August, 2022
Available data
264
bam
256
bigWig
175
fastq
144
bed narrowPeak
100
bigBed narrowPeak
89
tsv
59
tagAlign
26
bed bed3+
26
bed broadPeak
5
bed bedMethyl
5
bigBed bedMethyl
Organism
371
Homo sapiens
Biosample type
378
tissue
68
in vitro differentiated cells
64
primary cell
Organ
149
pancreas
57
adipose tissue
57
connective tissue
54
liver
50
blood vessel
50
vasculature
33
musculature of body
28
brain
heart
7
limb
5
artery
Project
378
AMP
Genome assembly (visualization)
258
hg19
235
GRCh38
Lab
378
AMP-T2D consortium
Audit category:
22
missing controlled_by
Audit category:
5
inconsistent control read length
1
inconsistent assembly
organ_slims!
heart
BIOSAMPLE
ASSAY
378 results
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Clear Filters
ChIP-seq
total RNA-seq
WGBS
RRBS
ATAC-seq
DNase-seq
FAIRE-seq
tissue
islet of Langerhans
42
89
1
1
liver
48
3
1
subcutaneous abdominal adipose tissue
36
3
skeletal muscle tissue
22
4
ascending aorta
16
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