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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
53
ChIP-seq
3
WGBS
1
ATAC-seq
1
DNase-seq
1
RRBS
1
total RNA-seq
Assay category
53
DNA binding
4
DNA methylation
2
DNA accessibility
1
Transcription
Target of assay
38
histone modification
37
histone
22
broad histone mark
15
narrow histone mark
11
control
4
transcription factor
Date released
193
May, 2020
54
August, 2017
48
December, 2017
40
May, 2022
8
July, 2019
7
November, 2018
6
October, 2019
3
March, 2020
1
February, 2020
1
February, 2021
Available data
32
bam
28
fastq
24
bigWig
23
bed narrowPeak
20
tagAlign
6
bigBed narrowPeak
3
bed bed3+
1
bed bedMethyl
1
bigBed bedMethyl
1
tsv
Organism
60
Homo sapiens
Biosample type
60
tissue
1
primary cell
Organ
150
pancreas
86
brain
69
limb
60
liver
59
connective tissue
58
adipose tissue
42
nerve
26
artery
26
blood vessel
26
musculature of body
26
vasculature
21
eye
8
heart
4
gonad
4
kidney
4
ovary
2
pituitary gland
1
lymph node
1
skin of body
Project
60
AMP
Genome assembly (visualization)
26
hg19
25
GRCh38
Lab
60
AMP-T2D consortium
Audit category:
1
inconsistent control read length
month_released!
May, 2023
BIOSAMPLE
ASSAY
60 results
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Clear Filters
ChIP-seq
WGBS
ATAC-seq
DNase-seq
RRBS
total RNA-seq
tissue
liver
53
3
1
1
right lobe of liver
1
1
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