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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
106
single cell RNA-seq
89
total RNA-seq
64
ATAC-seq
6
snATAC-seq
2
Hi-C
1
RNA microarray
1
pCHi-C
Assay category
195
Transcription
70
DNA accessibility
2
3D chromatin structure
Date released
545
February, 2021
284
August, 2017
242
October, 2019
229
August, 2021
193
May, 2020
163
June, 2019
120
July, 2018
115
May, 2019
95
February, 2023
82
November, 2017
80
April, 2019
77
July, 2019
74
October, 2018
66
May, 2022
48
December, 2017
47
September, 2023
40
March, 2020
40
May, 2021
40
May, 2024
40
November, 2019
26
November, 2018
February, 2020
23
October, 2017
19
April, 2020
15
May, 2023
8
January, 2021
7
December, 2018
January, 2019
6
April, 2018
6
September, 2017
5
March, 2019
4
November, 2020
3
December, 2019
2
January, 2018
1
August, 2022
Available data
137
tsv
64
bed narrowPeak
64
xls
57
txt
38
bam
38
bigWig
1
bedpe bed3+
1
hic
Organism
268
Homo sapiens
Biosample type
269
tissue
210
primary cell
174
in vitro differentiated cells
65
cell line
Organ
128
kidney
94
heart
39
pancreas
6
blood vessel
6
vasculature
2
artery
1
adipose tissue
1
connective tissue
1
thymus
Project
268
AMP
1
T1D
Genome assembly (visualization)
102
GRCh38
39
hg19
Lab
137
AMP-T2D consortium
128
Katalin Susztak, Upenn
2
Bing Ren, UCSD
2
Kyle Gaulton, UCSD
month_released!
February, 2020
January, 2019
BIOSAMPLE
ASSAY
269 results
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Clear Filters
single cell RNA-seq
total RNA-seq
ATAC-seq
snATAC-seq
Hi-C
RNA microarray
pCHi-C
tissue
kidney
8
49
64
6
1
islet of Langerhans
37
1
heart left ventricle
18
left cardiac atrium
18
right cardiac atrium
18
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