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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
26
total RNA-seq
11
ATAC-seq
3
ChIP-seq
3
single cell RNA-seq
Assay category
29
Transcription
11
DNA accessibility
3
DNA binding
Target of assay
control
3
transcription factor
Date released
545
February, 2021
255
August, 2017
229
August, 2021
215
October, 2019
170
May, 2020
163
June, 2019
120
July, 2018
95
February, 2023
93
May, 2019
77
July, 2019
70
November, 2017
66
April, 2019
66
May, 2022
47
September, 2023
45
October, 2018
40
March, 2020
40
May, 2021
40
May, 2024
40
November, 2019
36
December, 2017
25
February, 2020
23
November, 2018
20
October, 2017
19
April, 2020
15
May, 2023
8
January, 2021
6
April, 2018
6
January, 2019
5
March, 2019
3
December, 2018
3
December, 2019
2
January, 2018
2
November, 2020
1
August, 2022
Available data
25
tsv
3
bam
3
bed narrowPeak
3
bigBed narrowPeak
3
bigWig
3
fastq
Organism
43
Homo sapiens
Biosample type
43
tissue
28
cell line
Organ
14
kidney
12
brain
3
adipose tissue
3
blood vessel
3
connective tissue
3
heart
3
limb
3
spleen
3
vasculature
2
artery
2
musculature of body
1
eye
1
liver
1
nerve
1
pancreas
1
spinal cord
Project
43
AMP
Genome assembly (visualization)
15
GRCh38
4
hg19
Lab
29
AMP-T2D consortium
14
Katalin Susztak, Upenn
Audit category:
1
inconsistent ontology term
target.investigated_as!
control
BIOSAMPLE
ASSAY
43 results
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Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
single cell RNA-seq
tissue
kidney
11
3
spleen
3
Ammon's horn
1
C1 segment of cervical spinal cord
1
adipose tissue
1
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