Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
20
pCHi-C
9
ChIP-seq
9
total RNA-seq
7
Hi-C
2
ATAC-seq
Assay category
9
DNA binding
9
Transcription
7
3D chromatin structure
2
DNA accessibility
Target of assay
4
control
3
transcription factor
2
histone
2
histone modification
2
narrow histone mark
Date released
545
February, 2021
284
August, 2017
242
October, 2019
229
August, 2021
193
May, 2020
163
June, 2019
120
July, 2018
115
May, 2019
95
February, 2023
82
November, 2017
80
April, 2019
77
July, 2019
74
October, 2018
66
May, 2022
48
December, 2017
47
September, 2023
40
March, 2020
40
May, 2021
40
May, 2024
40
November, 2019
26
November, 2018
25
February, 2020
23
October, 2017
19
April, 2020
15
May, 2023
January, 2021
7
December, 2018
7
January, 2019
6
April, 2018
6
September, 2017
5
March, 2019
4
November, 2020
3
December, 2019
2
January, 2018
1
August, 2022
Available data
28
tsv
16
bam
14
bigWig
7
bedpe bed3+
7
fastq
7
hic
5
bed narrowPeak
3
bigBed narrowPeak
Organism
47
Homo sapiens
Biosample type
47
tissue
39
cell line
8
in vitro differentiated cells
4
stem cell
1
primary cell
Organ
9
pancreas
8
spleen
7
heart
5
musculature of body
3
blood vessel
3
liver
3
vasculature
2
brain
2
intestine
1
adipose tissue
1
adrenal gland
1
connective tissue
1
esophagus
1
gonad
1
large intestine
1
lung
1
ovary
1
small intestine
1
stomach
1
thymus
1
urinary bladder
Project
43
AMP
4
T1D
Genome assembly (visualization)
21
hg19
12
GRCh38
Lab
47
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
month_released!
January, 2021
BIOSAMPLE
ASSAY
47 results
search-icon
table-tab-icon
Clear Filters
pCHi-C
ChIP-seq
total RNA-seq
Hi-C
ATAC-seq
tissue
spleen
1
7
islet of Langerhans
2
2
2
psoas muscle
1
2
2
aorta
1
1
1
heart left ventricle
1
1
1
+ See 16 more…
See all biosamples
Download