Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
202
ChIP-seq
22
total RNA-seq
15
ATAC-seq
4
DNase-seq
4
pCHi-C
1
Hi-C
Assay category
202
DNA binding
22
Transcription
19
DNA accessibility
1
3D chromatin structure
Target of assay
168
histone
168
histone modification
129
narrow histone mark
39
broad histone mark
31
control
3
transcription factor
Date released
241
October, 2019
228
August, 2021
227
August, 2017
193
May, 2020
162
June, 2019
159
February, 2021
120
July, 2018
115
May, 2019
94
February, 2023
82
November, 2017
80
April, 2019
67
July, 2019
66
May, 2022
51
October, 2018
48
December, 2017
47
September, 2023
40
May, 2021
40
May, 2024
39
March, 2020
39
November, 2019
25
November, 2018
23
February, 2020
22
October, 2017
19
April, 2020
14
May, 2023
8
January, 2021
7
December, 2018
7
January, 2019
6
April, 2018
6
September, 2017
5
March, 2019
4
November, 2020
3
December, 2019
1
August, 2022
1
January, 2018
Available data
193
bam
162
bigWig
154
bed narrowPeak
49
bigBed narrowPeak
49
tagAlign
8
tsv
7
fastq
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bedpe bed3+
1
hic
1
tagAlign bed3+
Organism
248
Homo sapiens
Biosample type
248
tissue
58
cell line
34
primary cell
8
in vitro differentiated cells
Organ
86
brain
69
limb
42
nerve
26
artery
26
blood vessel
26
vasculature
21
eye
8
heart
7
spleen
6
liver
4
gonad
4
kidney
4
ovary
3
pancreas
2
connective tissue
2
pituitary gland
adipose tissue
1
lymph node
1
skin of body
Project
248
AMP
Genome assembly (visualization)
165
hg19
164
GRCh38
Lab
248
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
organ_slims!
adipose tissue
BIOSAMPLE
ASSAY
248 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
DNase-seq
pCHi-C
Hi-C
tissue
islet of Langerhans
21
14
13
4
tibial nerve
35
4
1
2
tibial artery
23
1
2
heart
5
2
1
spleen
7
+ See 78 more…
See all biosamples
Download