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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
24
total RNA-seq
15
ChIP-seq
8
ATAC-seq
Assay category
24
Transcription
15
DNA binding
8
DNA accessibility
Target of assay
12
histone
12
histone modification
10
broad histone mark
3
control
2
narrow histone mark
Date released
545
February, 2021
284
August, 2017
229
August, 2021
221
October, 2019
193
May, 2020
160
June, 2019
120
July, 2018
115
May, 2019
82
November, 2017
80
April, 2019
77
July, 2019
74
October, 2018
66
May, 2022
64
February, 2023
48
December, 2017
47
September, 2023
40
March, 2020
40
May, 2021
40
May, 2024
40
November, 2019
26
November, 2018
24
February, 2020
23
October, 2017
19
April, 2020
15
May, 2023
8
January, 2021
7
December, 2018
7
January, 2019
6
April, 2018
6
September, 2017
5
March, 2019
4
November, 2020
3
December, 2019
2
January, 2018
1
August, 2022
Available data
24
tsv
17
fastq
15
bam
14
bigWig
14
tagAlign
12
bed narrowPeak
6
bigBed narrowPeak
4
bed broadPeak
Organism
47
Homo sapiens
Biosample type
47
tissue
Organ
28
brain
6
pancreas
3
adipose tissue
3
blood vessel
3
connective tissue
3
heart
3
limb
3
vasculature
2
artery
2
musculature of body
eye
1
liver
1
nerve
1
spinal cord
1
spleen
Project
47
AMP
Genome assembly (visualization)
14
GRCh38
13
hg19
Lab
46
AMP-T2D consortium
1
Stephen Parker, UMich
Audit category:
1
inconsistent ontology term
Audit category:
4
missing controlled_by
organ_slims!
eye
BIOSAMPLE
ASSAY
47 results
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Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
tissue
brain
15
body of pancreas
1
4
cerebellum (Hemisphere)
1
1
omental fat pad
1
1
Ammon's horn
1
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