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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
475
total RNA-seq
84
RNA microarray
16
small RNA-seq
14
ATAC-seq
12
WGBS
6
RRBS
6
single cell RNA-seq
4
Hi-C
3
snDrop-seq
2
FAIRE-seq
Assay category
497
Transcription
18
DNA methylation
16
DNA accessibility
4
3D chromatin structure
Date released
545
February, 2021
284
August, 2017
242
October, 2019
229
August, 2021
193
May, 2020
145
June, 2019
120
July, 2018
115
May, 2019
95
February, 2023
82
November, 2017
80
April, 2019
77
July, 2019
74
October, 2018
66
May, 2022
48
December, 2017
47
September, 2023
40
March, 2020
40
May, 2021
40
May, 2024
40
November, 2019
26
November, 2018
25
February, 2020
23
October, 2017
19
April, 2020
15
May, 2023
8
January, 2021
7
December, 2018
7
January, 2019
6
April, 2018
6
September, 2017
5
March, 2019
4
November, 2020
3
December, 2019
2
January, 2018
1
August, 2022
Available data
516
bam
507
bigWig
499
tsv
89
txt
15
bed narrowPeak
14
bed bedMethyl
14
bigBed bedMethyl
6
csv
2
bigBed narrowPeak
Organism
622
Homo sapiens
Biosample type
622
tissue
96
cell line
79
primary cell
26
in vitro differentiated cells
Organ
454
connective tissue
396
adipose tissue
150
bone element
20
heart
12
kidney
11
brain
11
limb
9
liver
8
skeleton
7
blood vessel
7
musculature of body
7
vasculature
6
pancreas
1
artery
1
pericardium
Project
622
AMP
Genome assembly (visualization)
513
GRCh38
512
hg19
Lab
622
AMP-T2D consortium
Audit category:
84
inconsistent ontology term
5
audit script error
organ_slims!
ureter
BIOSAMPLE
ASSAY
622 results
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total RNA-seq
RNA microarray
small RNA-seq
ATAC-seq
WGBS
RRBS
single cell RNA-seq
Hi-C
snDrop-seq
FAIRE-seq
tissue
adipose tissue
381
bone element
84
bone tissue
58
heart left ventricle
2
2
4
1
kidney
1
5
1
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