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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
444
total RNA-seq
84
RNA microarray
59
ChIP-seq
8
ATAC-seq
6
single cell RNA-seq
3
snDrop-seq
Assay category
450
Transcription
59
DNA binding
8
DNA accessibility
Target of assay
89
histone
89
histone modification
broad histone mark
33
narrow histone mark
22
control
4
RNA binding protein
4
transcription factor
Date released
545
February, 2021
229
August, 2021
211
August, 2017
203
October, 2019
193
May, 2020
163
June, 2019
120
July, 2018
95
February, 2023
77
July, 2019
66
May, 2022
59
May, 2019
55
October, 2018
47
September, 2023
45
December, 2017
43
April, 2019
40
March, 2020
40
May, 2021
40
November, 2017
40
November, 2019
26
November, 2018
25
February, 2020
20
May, 2024
19
April, 2020
15
May, 2023
13
October, 2017
8
January, 2021
7
December, 2018
6
April, 2018
6
September, 2017
5
March, 2019
4
November, 2020
3
December, 2019
3
January, 2019
2
January, 2018
1
August, 2022
Available data
511
bam
481
bigWig
452
tsv
89
txt
45
bed narrowPeak
37
bigBed narrowPeak
6
csv
Organism
604
Homo sapiens
Biosample type
604
tissue
96
cell line
51
primary cell
26
in vitro differentiated cells
Organ
444
connective tissue
386
adipose tissue
150
bone element
28
blood vessel
28
vasculature
14
heart
13
brain
9
limb
8
kidney
8
skeleton
5
artery
3
musculature of body
2
pancreas
1
liver
Project
604
AMP
Genome assembly (visualization)
489
hg19
488
GRCh38
Lab
604
AMP-T2D consortium
Audit category:
84
inconsistent ontology term
5
audit script error
organ_slims!
vein
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
604 results
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Clear Filters
total RNA-seq
RNA microarray
ChIP-seq
ATAC-seq
single cell RNA-seq
snDrop-seq
tissue
adipose tissue
381
bone element
84
bone tissue
58
thoracic aorta
9
ascending aorta
8
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